Package: jaatha 3.2.5

Dirk Metzler

jaatha: Simulation-Based Maximum Likelihood Parameter Estimation

An estimation method that can use computer simulations to approximate maximum-likelihood estimates even when the likelihood function can not be evaluated directly. It can be applied whenever it is feasible to conduct many simulations, but works best when the data is approximately Poisson distributed. It was originally designed for demographic inference in evolutionary biology (Naduvilezhath et al., 2011 <doi:10.1111/j.1365-294X.2011.05131.x>, Mathew et al., 2013 <doi:10.1002/ece3.722>). It has optional support for conducting coalescent simulation using the 'coala' package.

Authors:Paul Staab [aut], Lisha Mathew [aut], Dirk Metzler [aut, ths, cre]

jaatha_3.2.5.tar.gz
jaatha_3.2.5.zip(r-4.7)jaatha_3.2.5.zip(r-4.6)jaatha_3.2.5.zip(r-4.5)
jaatha_3.2.5.tgz(r-4.6-any)jaatha_3.2.5.tgz(r-4.5-any)
jaatha_3.2.5.tar.gz(r-4.7-any)jaatha_3.2.5.tar.gz(r-4.6-any)
jaatha_3.2.5.tgz(r-4.6-emscripten)
manual.pdf |manual.html
DESCRIPTION |NEWS
card.svg |card.png
jaatha/json (API)

# Install 'jaatha' in R:
install.packages('jaatha', repos = c('https://statgenlmu.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/statgenlmu/jaatha/issues

On CRAN:

Conda:

4.65 score 3 stars 15 scripts 337 downloads 9 exports 2 dependencies

Last updated from:805633be96. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK131
source / vignettesOK203
linux-release-x86_64OK133
macos-release-arm64OK130
macos-oldrel-arm64OK193
windows-develOK99
windows-releaseOK81
windows-oldrelOK91
wasm-releaseOK101

Exports:boot_jaathacoarsen_jsfscreate_jaatha_datacreate_jaatha_modelcreate_jaatha_model.coalmodelcreate_jaatha_model.functioncreate_jaatha_statestimate_llhjaatha

Dependencies:assertthatR6

Introduction to Jaatha
The "real" data | Creating a model | Preparing the Data | Running Jaatha

Last update: 2022-08-13
Started: 2015-11-24

Demographic Inference with Jaatha
Creating a Model | Importing Data | Running Jaatha

Last update: 2022-02-14
Started: 2015-11-24