Package: jaatha 3.2.5

Dirk Metzler

jaatha: Simulation-Based Maximum Likelihood Parameter Estimation

An estimation method that can use computer simulations to approximate maximum-likelihood estimates even when the likelihood function can not be evaluated directly. It can be applied whenever it is feasible to conduct many simulations, but works best when the data is approximately Poisson distributed. It was originally designed for demographic inference in evolutionary biology (Naduvilezhath et al., 2011 <doi:10.1111/j.1365-294X.2011.05131.x>, Mathew et al., 2013 <doi:10.1002/ece3.722>). It has optional support for conducting coalescent simulation using the 'coala' package.

Authors:Paul Staab [aut], Lisha Mathew [aut], Dirk Metzler [aut, ths, cre]

jaatha_3.2.5.tar.gz
jaatha_3.2.5.zip(r-4.7-any)jaatha_3.2.5.zip(r-4.6-any)jaatha_3.2.5.zip(r-4.5-any)
jaatha_3.2.5.tgz(r-4.6-any)jaatha_3.2.5.tgz(r-4.5-any)
jaatha_3.2.5.tar.gz(r-4.7-any)jaatha_3.2.5.tar.gz(r-4.6-any)
jaatha_3.2.5.tgz(r-4.6-emscripten)
manual.pdf |manual.html
DESCRIPTION |NEWS
card.svg |card.png
jaatha/json (API)

# Install 'jaatha' in R:
install.packages('jaatha', repos = c('https://statgenlmu.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/statgenlmu/jaatha/issues

On CRAN:

Conda:

4.65 score 3 stars 15 scripts 250 downloads 9 exports 2 dependencies

Last updated from:805633be96. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK182
source / vignettesOK186
linux-release-x86_64OK151
macos-release-arm64OK168
macos-oldrel-arm64OK232
windows-develOK91
windows-releaseOK73
windows-oldrelOK86
wasm-releaseOK119

Exports:boot_jaathacoarsen_jsfscreate_jaatha_datacreate_jaatha_modelcreate_jaatha_model.coalmodelcreate_jaatha_model.functioncreate_jaatha_statestimate_llhjaatha

Dependencies:assertthatR6

Introduction to Jaatha
The "real" data | Creating a model | Preparing the Data | Running Jaatha

Last update: 2022-08-13
Started: 2015-11-24

Demographic Inference with Jaatha
Creating a Model | Importing Data | Running Jaatha

Last update: 2022-02-14
Started: 2015-11-24