{ "_id": "6a227abdcd65a98ecbd4d90b", "Package": "coala", "Version": "0.7.2", "License": "MIT + file LICENSE", "Title": "A Framework for Coalescent Simulation", "Authors@R": "c(\nperson('Paul', 'Staab', , 'develop@paulstaab.de', role=c('aut')),\nperson('Dirk', 'Metzler', , 'metzler@bio.lmu.de', role=c('aut', 'ths', 'cre')),\nperson('Jorge E.', 'Amaya Romero', role = 'ctb'))", "Author": "Paul Staab [aut], Dirk Metzler [aut, ths, cre], Jorge E. Amaya\nRomero [ctb]", "BugReports": "https://github.com/statgenlmu/coala/issues", "URL": "https://github.com/statgenlmu/coala", "Description": "Coalescent simulators can rapidly simulate biological\nsequences evolving according to a given model of evolution. You\ncan use this package to specify such models, to conduct the\nsimulations and to calculate additional statistics from the\nresults (Staab, Metzler, 2016\n). It relies on existing\nsimulators for doing the simulation, and currently supports the\nprograms 'ms', 'msms' and 'scrm'. It also supports finite-sites\nmutation models by combining the simulators with the program\n'seq-gen'. Coala provides functions for calculating certain\nsummary statistics, which can also be applied to actual\nbiological data. 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